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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "phylter" in publications use:'
type: software
license: GPL-2.0-or-later
title: 'phylter: Detect and Remove Outliers in Phylogenomics Datasets'
version: 0.9.12
doi: 10.32614/CRAN.package.phylter
abstract: Analyzis and filtering of phylogenomics datasets. It takes an input either
  a collection of gene trees (then transformed to matrices) or directly a collection
  of gene matrices and performs an iterative process to identify what species in what
  genes are outliers, and whose elimination significantly improves the concordance
  between the input matrices. The methods builds upon the Distatis approach (Abdi
  et al. (2005) <https://doi.org/10.1101/2021.09.08.459421>), a generalization of
  classical multidimensional scaling to multiple distance matrices.
authors:
- family-names: Vienne
  given-names: Damien M.
  name-particle: de
  email: damien.de-vienne@univ-lyon1.fr
- family-names: Dray
  given-names: Stéphane
  email: stephane.dray@univ-lyon1.fr
- family-names: Tricou
  given-names: Théo
  email: treecou.theo@gmail.com
- family-names: Siberchicot
  given-names: Aurélie
  email: aurelie.siberchicot@univ-lyon1.fr
repository: https://damiendevienne.r-universe.dev
repository-code: https://github.com/damiendevienne/phylter
commit: 942f855ff2f241d93f5bb7f965b7ed30e26efc6f
url: https://github.com/damiendevienne/phylter
contact:
- family-names: Siberchicot
  given-names: Aurélie
  email: aurelie.siberchicot@univ-lyon1.fr